ยท Lorena Pantano, Ph.D. , Alexandra Bartlett, Ph.D. ยท Podcast ยท 18 min listen
A Coffee with CompBio: The Spatial Transcriptomics Toolkit: Memory, Clustering, and Deconvolution
Alex and Lorena tackle the computational challenges of spatial transcriptomics.
Alex Barlett and Lorena Pantano tackle the computational challenges of spatial transcriptomics. Learn how ๐๐ฃ๐๐ฒ๐น๐น๐ can help you work with millions of cells without needing terabytes of RAM, discover how ๐๐ฎ๐ป๐ธ๐๐โ๐ neighborhood-aware clustering reveals tissue architecture, and explore ๐ฅ๐๐ง๐โ๐ approach to cell type deconvolution in spatially-resolved data. Plus, Lorena reviews ๐ฃ๐ผ๐๐ถ๐๐ฟ๐ผ๐ป, the new R-friendly IDE thatโs catching attention in the bioinformatics community.
https://lnkd.in/eZdQ-qKV - Sean Davis
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